Strain Passport - Brevibacillus reuszeri

1. Taxonomy

Taxonomy
Domain Bacteria
Phylum Firmicutes
Class Bacilli
Order Brevibacillales
Family Brevibacillaceae
Genus Brevibacillus
Species Brevibacillus reuszeri_A

2. Assembly Statistics

Assembly Statistics
MAGID MAG27
Size (bp) 6456197
N.contigs 162
GC (%) 47.1
N50 (bp) 66021
Coding Density 87.5
N.CDSs 6221
Genome Completeness
Completeness 99.19
Contamination 2.23
Strain heterogeneity 12.50

3. Metabolism and Function (KEGG)

KEGG Function Annotation

Brevibacillus reuszeri KEGG Functional Classification

KEGG Resistome

name Type Level1 Level2 Description KO
ko01504 Gene variants Aminoglycoside resistance genes N-Acetyltransferases K00663 aacA; aminoglycoside 6’-N-acetyltransferase [EC:2.3.1.82] K00663
ko01504 Gene variants Aminoglycoside resistance genes Other acetyltransferases K19273 sat4; streptothricin acetyltransferase [EC:2.3.-.-] K19273
ko01504 Gene variants Aminoglycoside resistance genes O-Nucleotidyltransferases K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47] K00984
ko01504 Gene variants Aminoglycoside resistance genes O-Nucleotidyltransferases K17882 aadD, knt; kanamycin nucleotidyltransferase [EC:2.7.7.-] K17882
ko01504 Gene variants Aminoglycoside resistance genes O-Nucleotidyltransferases K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-] K05593
ko01504 Gene variants Aminoglycoside resistance genes O-Phosphotransferases K17880 hyg; hygromycin-B 7’’-O-kinase [EC:2.7.1.119] K17880
ko01504 Gene variants Aminoglycoside resistance genes O-Phosphotransferases K18844 aph, spcN; spectinomycin phosphotransferase K18844
ko01504 Gene variants Tetracycline resistance genes Transporters K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter K08168
ko01504 Gene variants Tetracycline resistance genes Transporters K18214 tetP_A, tet40; MFS transporter, DHA3 family, tetracycline resistance protein K18214
ko01504 Gene variants Tetracycline resistance genes Transporters K18218 tet35; tetracycline resistance efflux pump K18218
ko01504 Gene variants Tetracycline resistance genes Others K18220 tetM, tetO; ribosomal protection tetracycline resistance protein K18220
ko01504 Gene variants Macrolide resistance genes 23S rRNA methyltransferases K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224] K15632
ko01504 Gene variants Macrolide resistance genes Transporters K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein K19350
ko01504 Gene variants Macrolide resistance genes Transporters K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein K08217
ko01504 Gene variants Macrolide resistance genes Others K06880 ereA_B; erythromycin esterase [EC:3.1.1.-] K06880
ko01504 Gene variants Phenicol resistance genes Acetyltransferases K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] K19271
ko01504 Gene variants Phenicol resistance genes 23S rRNA methyltransferase K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224] K15632
ko01504 Gene variants Quinolone resistance genes Transporter K08167 smvA, qacA, lfrA; MFS transporter, DHA2 family, multidrug resistance protein K08167
ko01504 Gene sets beta-Lactam resistance modules beta-Lactam resistance, Bla system [MD:M00627] K02172 blaR1; bla regulator protein blaR1 K02172
ko01504 Gene sets beta-Lactam resistance modules beta-Lactam resistance, Bla system [MD:M00627] K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor K02171
ko01504 Gene sets beta-Lactam resistance modules beta-Lactam resistance, Bla system [MD:M00627] K17836 penP; beta-lactamase class A [EC:3.5.2.6] K17836
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K18345 vanSB, vanS, vanSD; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] K18345
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] K07260
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K18346 vanW; vancomycin resistance protein VanW K18346
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] K08641
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Ser type [MD:M00652] K18350 vanSC, vanSE, vanSG; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] K18350
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Ser type [MD:M00652] K18349 vanRC, vanRE, vanRG; two-component system, OmpR family, response regulator VanR K18349
ko01504 Gene sets Vancomycin resistance modules Tetracycline resistance, efflux pump Tet38 [MD:M00704] K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter K08168
ko01504 Gene sets Multipdrug resistance modules Multidrug resistance, efflux pump AbcA [MD:M00700] K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC K18907
ko01504 Gene sets Multipdrug resistance modules Multidrug resistance, efflux pump AbcA [MD:M00700] K18104 abcA, bmrA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] K18104
ko01504 Gene sets Multipdrug resistance modules Multidrug resistance, efflux pump NorB [MD:M00702] K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC K18907
ko01504 Gene sets Multipdrug resistance modules Multidrug resistance, efflux pump QacA [MD:M00714] K08167 smvA, qacA, lfrA; MFS transporter, DHA2 family, multidrug resistance protein K08167

KEGG Toxins

name Type Level1 Level2 Description KO
ko02042 Type II toxins: Membrane damaging toxins Pore-forming toxins, Other K03699 tlyC; magnesium and cobalt exporter, CNNM family tlyC; magnesium and cobalt exporter, CNNM family K03699

KEGG Bacterial Virulence

GeneID KO Description PFAM
MAG27_JBNEKJ_02875 K03596 GTP-binding protein LepA GTP-binding protein LepA C-terminus [PF06421.15]…
MAG27_JBNEKJ_13940 K08303 U32 family peptidase [EC:3.4.-.-] Peptidase family U32 [PF01136.22]…

Carbon Metabolism

Nitrogen Metabolism

4. Expert systems

AMRFinderPlus Antimicrobial Resistance

AMRFinderPlus
locus pscc.product gene_family class subclass
JBNEKJ_11465 Regulatory protein BlaR1 blaR1 BETA-LACTAM BETA-LACTAM
JBNEKJ_11470 Beta-lactamase bla BETA-LACTAM BETA-LACTAM
JBNEKJ_19405 GCN5-related N-acetyltransferase arsN1 ARSENIC ARSENIC
JBNEKJ_21675 Chloramphenicol acetyltransferase catA PHENICOL CHLORAMPHENICOL
JBNEKJ_23535 Ribosomal RNA large subunit methyltransferase Cfr clbC LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN

Virulence factors (VFDB)

## No VFDB data

5. BacDive

BacDive
Species Brevibacillus reuszeri
ncbi_taxid 54915
taxid_matching_level species
type_strain no
medium_name NUTRIENT AGAR (DSMZ Medium 1)
medium_link NA
strain_history NA
gram NA
length NA
width NA
motility NA
oxygen_tolerance NA
spore NA
aggregation_score NA
GC_content NA
antibiotic_resistance_chebi NA
antibiotic_resistance_metabolite NA

6. Publications

7. U.S. Patents

First 10 patents out of 42

patent_number patent_title
10154670 Compositions comprising Bacillus strains and methods of use to suppress the activities and growth of fungal plant pathogens
10602743 Method of inducing drought/salt tolerance using Bacillus megaterium
10645936 Bacillus megaterium bioactive compositions and metabolites
10683470 Product for cleaning, sanitizing and hygienization
4332898 Hybrid plasmid and process of making same
4427771 Assay method for amylase activity and method of producing maltose dehydrogenase for use therein
4542098 Production of glucose dehydrogenase and use of the resultant enzyme in the enzymatic synthesis of L-carnitine
4554250 Method of increased production of penicillin acylase and plasmid employed therein
4935359 Fermentation process
5030574 Plasmidless Lac strain of bacilus megaterium QM B1551